› 3dyu

X-ray diffraction
4.1Å resolution

Crystal structure of Snx9PX-BAR (230-595), H32

Released:
DOI: 10.2210/pdb3dyu/pdb
PDB entry 3dyu coloured by chain, front view.
PDB entry 3dyu coloured by chain, side view.
PDB entry 3dyu coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Structure and plasticity of Endophilin and Sorting Nexin 9.
Wang Q, Kaan HY, Hooda RN, Goh SL, Sondermann H
Structure 16 1574-87 (2008)
PMID: 18940612

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-195298 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Sorting nexin-9 Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 366 amino acids
Theoretical weight: 42.42 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9Y5X1 (Residues: 230-595; Coverage: 62%)
Gene names: SH3PX1, SH3PXD3A, SNX9
Sequence domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-C
Spacegroup: R32
Unit cell:
a: 131.765Å b: 131.765Å c: 569.072Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.388 0.388 0.403
Expression system: Escherichia coli

Quick links

Citations

15 review citations

Regulation of the actin cytoskeleton-plasma membrane interplay by phosphoinositides.
Saarikangas et al. (2010)
14 more

2 mentions without citation

The phosphorylation of sorting nexin 5 at serine 226 regulates retrograde transport and macropinocytosis.
Itai et al. (2018)
1 more