3eoy

X-ray diffraction
3.4Å resolution

Structure of Reovirus sigma1 in Complex with Its Receptor Junctional Adhesion Molecule-A

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-137114 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Outer capsid protein sigma-1 Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 165 amino acids
Theoretical weight: 17.92 KDa
Source organism: Mammalian orthoreovirus 3 Dearing
Expression system: Escherichia coli
UniProt:
  • Canonical: P03528 (Residues: 293-455; Coverage: 36%)
Gene name: S1
Sequence domains: Reovirus viral attachment protein sigma 1
Structure domains: Virus attachment protein , globular domain
Junctional adhesion molecule A Chains: G, H, I, J, K, L
Molecule details ›
Chains: G, H, I, J, K, L
Length: 104 amino acids
Theoretical weight: 11.52 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9Y624 (Residues: 28-129; Coverage: 38%)
Gene names: F11R, JAM1, JCAM, UNQ264/PRO301
Sequence domains: Immunoglobulin V-set domain
Structure domains: Immunoglobulins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X06SA
Spacegroup: P21212
Unit cell:
a: 105.94Å b: 124.34Å c: 130.659Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.21 0.21 0.252
Expression system: Escherichia coli