› 3h2p

X-ray diffraction
1.55Å resolution

Human SOD1 D124V Variant

Released:
DOI: 10.2210/pdb3h2p/pdb
PDB entry 3h2p coloured by chain, front view.
PDB entry 3h2p coloured by chain, side view.
PDB entry 3h2p coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Seetharaman SV, Winkler DD, Taylor AB, Cao X, Whitson LJ, Doucette PA, Valentine JS, Carroll MC, Culotta VC, Hart PJ

Function and Biology Details

Reaction catalysed: 
2 superoxide + 2 H(+) = O(2) + H(2)O(2)
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132494 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Superoxide dismutase [Cu-Zn] Chains: A, B
Molecule details ›
Chains: A, B
Length: 153 amino acids
Theoretical weight: 15.81 KDa
Source organism: Homo sapiens
Expression system: Saccharomyces cerevisiae
UniProt:
  • Canonical: P00441 (Residues: 2-154; Coverage: 99%)
Gene name: SOD1
Sequence domains: Copper/zinc superoxide dismutase (SODC)
Structure domains: Superoxide dismutase, copper/zinc binding domain

Ligands and Environments

3 bound ligands:
Ligand ZN 3 x ZN
Ligand MLI 2 x MLI
Ligand ACE 1 x ACE
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 5.0.2
Spacegroup: P212121
Unit cell:
a: 39.919Å b: 57.972Å c: 105.021Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.155 0.152 0.202
Expression system: Saccharomyces cerevisiae

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