3ij2

X-ray diffraction
3.75Å resolution

Ligand-receptor structure

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-134073 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Beta-nerve growth factor Chains: A, B
Molecule details ›
Chains: A, B
Length: 230 amino acids
Theoretical weight: 25.45 KDa
Source organism: Mus musculus
Expression system: Trichoplusia ni
UniProt:
  • Canonical: P01139 (Residues: 19-241; Coverage: 100%)
Gene names: Ngf, Ngfb
Sequence domains: Nerve growth factor family
Structure domains: Cystine-knot cytokines
Tumor necrosis factor receptor superfamily member 16 Chains: X, Y
Molecule details ›
Chains: X, Y
Length: 171 amino acids
Theoretical weight: 18.48 KDa
Source organism: Rattus norvegicus
Expression system: Trichoplusia ni
UniProt:
  • Canonical: P07174 (Residues: 30-190; Coverage: 41%)
Gene names: Ngfr, Tnfrsf16
Sequence domains: TNFR/NGFR cysteine-rich region
Structure domains: Tumor Necrosis Factor Receptor, subunit A, domain 2

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.2
Spacegroup: P3221
Unit cell:
a: 145.406Å b: 145.406Å c: 114.252Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.256 0.256 0.274
Expression system: Trichoplusia ni