› 3jbp

Electron Microscopy
6.7Å resolution

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA

Released:
DOI: 10.2210/pdb3jbp/pdb
PDB entry 3jbp coloured by chain, front view.
PDB entry 3jbp coloured by chain, side view.
PDB entry 3jbp coloured by chain, top view.
Source organism: Plasmodium falciparum 3D7
Primary publication:
Dynamical features of the Plasmodium falciparum ribosome during translation.
Sun M, Li W, Blomqvist K, Das S, Hashem Y, Dvorin JD, Frank J
Nucleic Acids Res 43 10515-24 (2015)
PMID: 26432834
Related structures: EMD-6454

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero 78-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-215638 (preferred)
Entry contents:
73 distinct polypeptide molecules
5 distinct RNA molecules
Macromolecules (78 distinct):
40S ribosomal protein S3 Chain: D
Molecule details ›
Chain: D
Length: 209 amino acids
Theoretical weight: 23.42 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IKH8 (Residues: 4-212; Coverage: 95%)
Gene name: PF3D7_1465900
Sequence domains:
40S ribosomal protein S9, putative Chain: E
Molecule details ›
Chain: E
Length: 185 amino acids
Theoretical weight: 21.71 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8I3R0 (Residues: 2-186; Coverage: 98%)
Gene name: PF3D7_0520000
Sequence domains:
S5 DRBM domain-containing protein Chain: G
Molecule details ›
Chain: G
Length: 224 amino acids
Theoretical weight: 25 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IL02 (Residues: 39-262; Coverage: 82%)
Gene name: PF3D7_1447000
Sequence domains:
Small ribosomal subunit protein uS7 domain-containing protein Chain: I
Molecule details ›
Chain: I
Length: 189 amino acids
Theoretical weight: 21.26 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IBN5 (Residues: 7-195; Coverage: 97%)
Gene name: PF3D7_0721600
Sequence domains: Ribosomal protein S7p/S5e
40S ribosomal protein S15A, putative Chain: K
Molecule details ›
Chain: K
Length: 129 amino acids
Theoretical weight: 14.77 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: O77395 (Residues: 2-130; Coverage: 99%)
Gene name: PF3D7_0316800
Sequence domains: Ribosomal protein S8
40S ribosomal protein S16, putative Chain: M
Molecule details ›
Chain: M
Length: 138 amino acids
Theoretical weight: 15.6 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IAX5 (Residues: 6-143; Coverage: 96%)
Gene name: PF3D7_0813900
Sequence domains: Ribosomal protein S9/S16
40S ribosomal protein S17, putative Chain: W
Molecule details ›
Chain: W
Length: 108 amino acids
Theoretical weight: 12.67 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8I502 (Residues: 3-110; Coverage: 79%)
Gene name: PF3D7_1242700
Sequence domains: Ribosomal S17
Small ribosomal subunit protein eS12 Chain: R
Molecule details ›
Chain: R
Length: 114 amino acids
Theoretical weight: 12.51 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: O97249 (Residues: 22-135; Coverage: 81%)
Gene names: MAL3P2.28, PF3D7_0307100, PFC0295C, RPS12, eS12
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Plectin/eS10 N-terminal domain-containing protein Chain: O
Molecule details ›
Chain: O
Length: 79 amino acids
Theoretical weight: 9.71 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IBQ5 (Residues: 11-89; Coverage: 58%)
Gene name: PF3D7_0719700
Sequence domains: Plectin/S10 domain
40S ribosomal protein S19 Chain: Y
Molecule details ›
Chain: Y
Length: 154 amino acids
Theoretical weight: 17.94 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IFP2 (Residues: 15-168; Coverage: 91%)
Gene name: PF3D7_0422400
Sequence domains: Ribosomal protein S19e
40S ribosomal protein S21 Chain: Z
Molecule details ›
Chain: Z
Length: 72 amino acids
Theoretical weight: 7.97 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IHS5 (Residues: 11-82; Coverage: 88%)
Gene name: PF3D7_1144000
Sequence domains: Ribosomal protein S21e
40S ribosomal protein S24 Chain: 1
Molecule details ›
Chain: 1
Length: 120 amino acids
Theoretical weight: 14.01 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8I3R6 (Residues: 3-122; Coverage: 90%)
Gene name: PF3D7_0519400
Sequence domains: Ribosomal protein S24e
40S ribosomal protein S25 Chain: 2
Molecule details ›
Chain: 2
Length: 68 amino acids
Theoretical weight: 7.65 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8ILN8 (Residues: 35-102; Coverage: 65%)
Gene name: PF3D7_1421200
Sequence domains: S25 ribosomal protein
40S ribosomal protein S26 Chain: 3
Molecule details ›
Chain: 3
Length: 95 amino acids
Theoretical weight: 11.2 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: O96258 (Residues: 2-96; Coverage: 89%)
Gene name: PF3D7_0217800
Sequence domains: Ribosomal protein S26e
40S ribosomal protein S27 Chain: 4
Molecule details ›
Chain: 4
Length: 76 amino acids
Theoretical weight: 8.47 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IEN2 (Residues: 7-82; Coverage: 93%)
Gene name: PF3D7_1308300
Sequence domains: Ribosomal protein S27
40S ribosomal protein S28e, putative Chain: 5
Molecule details ›
Chain: 5
Length: 65 amino acids
Theoretical weight: 7.22 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IKL9 (Residues: 2-66; Coverage: 97%)
Gene name: PF3D7_1461300
Sequence domains: Ribosomal protein S28e
Small ribosomal subunit protein eS30 Chain: 6
Molecule details ›
Chain: 6
Length: 43 amino acids
Theoretical weight: 4.93 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: O96269 (Residues: 6-48; Coverage: 74%)
Gene names: PF3D7_0219200, PFB0885w, RPS30, eS30
Sequence domains: Ribosomal protein S30
Small ribosomal subunit protein eS1 Chain: B
Molecule details ›
Chain: B
Length: 210 amino acids
Theoretical weight: 24.52 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: O97313 (Residues: 24-233; Coverage: 80%)
Gene names: MAL3P7.35, PF3D7_0322900, PFC1020c, RPS3A, eS1
Sequence domains: Ribosomal S3Ae family
40S ribosomal protein S4 Chain: F
Molecule details ›
Chain: F
Length: 257 amino acids
Theoretical weight: 29.36 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IIU8 (Residues: 2-258; Coverage: 99%)
Gene name: PF3D7_1105400
Sequence domains:
40S ribosomal protein S6 Chain: H
Molecule details ›
Chain: H
Length: 214 amino acids
Theoretical weight: 24.61 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IDR9 (Residues: 1-157, 159-213; Coverage: 69%)
Gene name: PF3D7_1342000
Sequence domains: Ribosomal protein S6e
40S ribosomal protein S7 Chain: J
Molecule details ›
Chain: J
Length: 188 amino acids
Theoretical weight: 21.8 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IET7 (Residues: 3-190; Coverage: 97%)
Gene name: PF3D7_1302800
Sequence domains: Ribosomal protein S7e
40S ribosomal protein S8 Chain: L
Molecule details ›
Chain: L
Length: 214 amino acids
Theoretical weight: 24.72 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IM10 (Residues: 5-218; Coverage: 98%)
Gene name: PF3D7_1408600
Sequence domains: Ribosomal protein S8e
Small ribosomal subunit protein uS10 domain-containing protein Chain: N
Molecule details ›
Chain: N
Length: 98 amino acids
Theoretical weight: 11.07 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IK02 (Residues: 21-118; Coverage: 83%)
Gene name: PF3D7_1003500
Sequence domains: Ribosomal protein S10p/S20e
40S ribosomal protein uS11 Chain: P
Molecule details ›
Chain: P
Length: 127 amino acids
Theoretical weight: 13.61 KDa
Source organism: Plasmodium falciparum 3D7
40S ribosomal protein S23, putative Chain: Q
Molecule details ›
Chain: Q
Length: 144 amino acids
Theoretical weight: 16.04 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: O97248 (Residues: 2-145; Coverage: 99%)
Gene name: PF3D7_0306900
Sequence domains: Ribosomal protein S12/S23
40S ribosomal protein S18, putative Chain: S
Molecule details ›
Chain: S
Length: 128 amino acids
Theoretical weight: 14.92 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IIA2 (Residues: 12-139; Coverage: 82%)
Gene name: PF3D7_1126200
Sequence domains: Ribosomal protein S13/S18
40S ribosomal protein S29, putative Chain: T
Molecule details ›
Chain: T
Length: 48 amino acids
Theoretical weight: 5.8 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: C0H4K8 (Residues: 7-54; Coverage: 89%)
Gene name: PF3D7_0705700
Sequence domains: Ribosomal protein S14p/S29e
Small ribosomal subunit protein uS15 N-terminal domain-containing protein Chain: U
Molecule details ›
Chain: U
Length: 149 amino acids
Theoretical weight: 17.1 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IDB0 (Residues: 3-151; Coverage: 99%)
Gene name: PF3D7_1358800
Sequence domains:
Small ribosomal subunit protein uS17 N-terminal domain-containing protein Chain: V
Molecule details ›
Chain: V
Length: 156 amino acids
Theoretical weight: 18.28 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: O77381 (Residues: 6-161; Coverage: 97%)
Gene name: PF3D7_0317600
Sequence domains:
40S ribosomal protein S19 Chain: X
Molecule details ›
Chain: X
Length: 103 amino acids
Theoretical weight: 11.92 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: C0H5C2 (Residues: 21-123; Coverage: 71%)
Gene name: PF3D7_1317800
Sequence domains: Ribosomal protein S19
Small ribosomal subunit protein uS2 Chain: C
Molecule details ›
Chain: C
Length: 195 amino acids
Theoretical weight: 21.93 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IJD4 (Residues: 10-204; Coverage: 74%)
Gene names: PF10_0264, PF3D7_1026800, RPS2, uS2
Sequence domains: Ribosomal protein S2
60S ribosomal protein L13 Chain: AL
Molecule details ›
Chain: AL
Length: 211 amino acids
Theoretical weight: 24.96 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IAX6 (Residues: 2-212; Coverage: 98%)
Gene name: PF3D7_0814000
Sequence domains: Ribosomal protein L13e
60S ribosomal protein L27 Chain: A1
Molecule details ›
Chain: A1
Length: 145 amino acids
Theoretical weight: 16.65 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IKM5 (Residues: 2-146; Coverage: 99%)
Gene name: PF3D7_1460700
Sequence domains: Ribosomal L27e protein family
Ribosomal eL28/Mak16 domain-containing protein Chain: A2
Molecule details ›
Chain: A2
Length: 118 amino acids
Theoretical weight: 13.38 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IHU0 (Residues: 2-119; Coverage: 93%)
Gene name: PF3D7_1142500
Sequence domains: Ribosomal L28e protein family
60S ribosomal protein L29 Chain: A4
Molecule details ›
Chain: A4
Length: 66 amino acids
Theoretical weight: 7.91 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: C6S3J6 (Residues: 2-67; Coverage: 99%)
Gene name: PF3D7_1460300
Sequence domains: Ribosomal L29e protein family
Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein Chain: A6
Molecule details ›
Chain: A6
Length: 98 amino acids
Theoretical weight: 10.64 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IJK8 (Residues: 8-105; Coverage: 91%)
Gene name: PF3D7_1019400
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
60S ribosomal protein L31 Chain: A7
Molecule details ›
Chain: A7
Length: 102 amino acids
Theoretical weight: 12.05 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8I463 (Residues: 15-116; Coverage: 85%)
Gene name: PF3D7_0503800
Sequence domains: Ribosomal protein L31e
Large ribosomal subunit protein eL14 domain-containing protein Chain: AN
Molecule details ›
Chain: AN
Length: 146 amino acids
Theoretical weight: 17.14 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8ILE8 (Residues: 4-150; Coverage: 89%)
Gene name: PF3D7_1431700
Sequence domains: Ribosomal protein L14
60S ribosomal protein L32 Chain: A8
Molecule details ›
Chain: A8
Length: 125 amino acids
Theoretical weight: 14.82 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8I3B0 (Residues: 2-126; Coverage: 95%)
Gene name: PF3D7_0903900
Sequence domains: Ribosomal protein L32
60S ribosomal protein L35ae, putative Chain: A9
Molecule details ›
Chain: A9
Length: 103 amino acids
Theoretical weight: 11.98 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IHT9 (Residues: 35-137; Coverage: 74%)
Gene name: PF3D7_1142600
Sequence domains: Ribosomal protein L35Ae
60S ribosomal protein L34 Chain: Aa
Molecule details ›
Chain: Aa
Length: 106 amino acids
Theoretical weight: 12.29 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IBY4 (Residues: 2-107; Coverage: 71%)
Gene name: PF3D7_0710600
Sequence domains: Ribosomal protein L34e
60S ribosomal protein L36 Chain: Ab
Molecule details ›
Chain: Ab
Length: 105 amino acids
Theoretical weight: 12.03 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8I713 (Residues: 2-106; Coverage: 94%)
Gene name: PF3D7_1109900
Sequence domains: Ribosomal protein L36e
60S ribosomal protein L38 Chain: Ad
Molecule details ›
Chain: Ad
Length: 76 amino acids
Theoretical weight: 9.08 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8II62 (Residues: 2-77; Coverage: 87%)
Gene name: PF3D7_1130100
Sequence domains: Ribosomal L38e protein family
60S ribosomal protein L39 Chain: Ae
Molecule details ›
Chain: Ae
Length: 50 amino acids
Theoretical weight: 6.41 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: C0H4H3 (Residues: 2-51; Coverage: 98%)
Gene name: PF3D7_0611700
Sequence domains: Ribosomal L39 protein
Ubiquitin-like domain-containing protein Chain: Af
Molecule details ›
Chain: Af
Length: 51 amino acids
Theoretical weight: 5.97 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8ID50 (Residues: 77-127; Coverage: 40%)
Gene name: PF3D7_1365900
Sequence domains: Ribosomal L40e family
Ribosomal protein L15 Chain: AP
Molecule details ›
Chain: AP
Length: 204 amino acids
Theoretical weight: 24.07 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: C0H4A6 (Residues: 2-205; Coverage: 100%)
Gene name: PF3D7_0415900
Sequence domains: Ribosomal L15
Large ribosomal subunit protein eL43 Chain: Ah
Molecule details ›
Chain: Ah
Length: 85 amino acids
Theoretical weight: 9.48 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: O96184 (Residues: 2-86; Coverage: 89%)
Gene names: PF3D7_0210100, PFB0455w, RPL37A, eL43
Sequence domains: Ribosomal L37ae protein family
Large ribosomal subunit protein eL42 Chain: Ai
Molecule details ›
Chain: Ai
Length: 95 amino acids
Theoretical weight: 11.23 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: O97231 (Residues: 2-96; Coverage: 91%)
Gene names: MAL3P2.9, PF3D7_0304400, PFC0200W, RPL44, eL44
Sequence domains: Ribosomal protein L44
60S ribosomal protein eL6 Chain: AI
Molecule details ›
Chain: AI
Length: 213 amino acids
Theoretical weight: 24.7 KDa
Source organism: Plasmodium falciparum 3D7
60S ribosomal protein L7a Chain: AJ
Molecule details ›
Chain: AJ
Length: 244 amino acids
Theoretical weight: 28.38 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8ILL2 (Residues: 40-283; Coverage: 86%)
Gene name: PF3D7_1424400
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Ribosomal protein L37 Chain: Ac
Molecule details ›
Chain: Ac
Length: 89 amino acids
Theoretical weight: 10.16 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: C0H4L5 (Residues: 2-90; Coverage: 97%)
Gene name: PF3D7_0706400
Sequence domains: Ribosomal protein L37e
60S ribosomal protein L13, putative Chain: AK
Molecule details ›
Chain: AK
Length: 201 amino acids
Theoretical weight: 23.64 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IJZ7 (Residues: 1-201; Coverage: 100%)
Gene name: PF3D7_1004000
Sequence domains: Ribosomal protein L13
60S ribosomal protein L23, putative Chain: AM
Molecule details ›
Chain: AM
Length: 132 amino acids
Theoretical weight: 14.26 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IE09 (Residues: 8-139; Coverage: 95%)
Gene name: PF3D7_1331800
Sequence domains: Ribosomal protein L14p/L23e
Large ribosomal subunit protein uL15/eL18 domain-containing protein Chain: AS
Molecule details ›
Chain: AS
Length: 186 amino acids
Theoretical weight: 21.38 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: C0H5G3 (Residues: 2-187; Coverage: 100%)
Gene name: PF3D7_1341300
Sequence domains: Ribosomal protein 60S L18 and 50S L18e
Large ribosomal subunit protein uL15/eL18 domain-containing protein Chain: AO
Molecule details ›
Chain: AO
Length: 147 amino acids
Theoretical weight: 16.63 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: C6KT23 (Residues: 2-148; Coverage: 99%)
Gene name: PF3D7_0618300
Sequence domains: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
60S ribosomal protein L10, putative Chain: AQ
Molecule details ›
Chain: AQ
Length: 205 amino acids
Theoretical weight: 23.61 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8ILV2 (Residues: 2-206; Coverage: 94%)
Gene name: PF3D7_1414300
Sequence domains: Ribosomal protein L16p/L10e
Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein Chain: AR
Molecule details ›
Chain: AR
Length: 289 amino acids
Theoretical weight: 33.47 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8ILL3 (Residues: 5-291; Coverage: 98%)
Gene name: PF3D7_1424100
Sequence domains:
60S ribosomal protein L17, putative Chain: AW
Molecule details ›
Chain: AW
Length: 170 amino acids
Theoretical weight: 19.07 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IDI5 (Residues: 4-154; Coverage: 74%)
Gene name: PF3D7_1351400
Sequence domains: Ribosomal protein L22p/L17e
Large ribosomal subunit protein uL23 N-terminal domain-containing protein Chain: AY
Molecule details ›
Chain: AY
Length: 101 amino acids
Theoretical weight: 11.43 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IE82 (Residues: 88-188; Coverage: 53%)
Gene name: PF3D7_1323400
Sequence domains: Ribosomal protein L23
Large ribosomal subunit protein eL19 domain-containing protein Chain: AT
Molecule details ›
Chain: AT
Length: 181 amino acids
Theoretical weight: 21.51 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: C6KSY6 (Residues: 2-182; Coverage: 100%)
Gene name: PF3D7_0614500
Sequence domains: Ribosomal protein L19e
KOW domain-containing protein Chain: AZ
Molecule details ›
Chain: AZ
Length: 121 amino acids
Theoretical weight: 14.28 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: O77364 (Residues: 2-122; Coverage: 96%)
Gene name: PF3D7_0312800
Sequence domains:
60S ribosomal protein L35, putative Chain: A3
Molecule details ›
Chain: A3
Length: 119 amino acids
Theoretical weight: 14.17 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IIB4 (Residues: 3-121; Coverage: 96%)
Gene name: PF3D7_1124900
Sequence domains: Ribosomal L29 protein
60S ribosomal protein L7, putative Chain: A5
Molecule details ›
Chain: A5
Length: 223 amino acids
Theoretical weight: 26.65 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: O97250 (Residues: 35-257; Coverage: 87%)
Gene name: PF3D7_0307200
Sequence domains:
Large ribosomal subunit protein uL2 C-terminal domain-containing protein Chain: AD
Molecule details ›
Chain: AD
Length: 247 amino acids
Theoretical weight: 26.63 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8I3T9 (Residues: 2-248; Coverage: 95%)
Gene name: PF3D7_0516900
Sequence domains:
60S ribosomal protein L3 Chain: AE
Molecule details ›
Chain: AE
Length: 380 amino acids
Theoretical weight: 43.63 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IJC6 (Residues: 2-381; Coverage: 98%)
Gene name: PF3D7_1027800
Sequence domains: Ribosomal protein L3
Large ribosomal subunit protein uL4 C-terminal domain-containing protein Chain: AF
Molecule details ›
Chain: AF
Length: 390 amino acids
Theoretical weight: 44.08 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8I431 (Residues: 6-395; Coverage: 95%)
Gene name: PF3D7_0507100
Sequence domains:
60S ribosomal protein L11a, putative Chain: AG
Molecule details ›
Chain: AG
Length: 159 amino acids
Theoretical weight: 18.61 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IBQ6 (Residues: 8-166; Coverage: 92%)
Gene name: PF3D7_0719600
Sequence domains:
60S ribosomal protein L18a Chain: AU
Molecule details ›
Chain: AU
Length: 180 amino acids
Theoretical weight: 21.3 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IDS6 (Residues: 5-184; Coverage: 98%)
Gene name: PF3D7_1341200
Sequence domains: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
Large ribosomal subunit protein uL6 alpha-beta domain-containing protein Chain: AH
Molecule details ›
Chain: AH
Length: 185 amino acids
Theoretical weight: 21 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IE85 (Residues: 2-186; Coverage: 97%)
Gene name: PF3D7_1323100
Sequence domains: Ribosomal protein L6
60S ribosomal protein L21 Chain: AV
Molecule details ›
Chain: AV
Length: 155 amino acids
Theoretical weight: 18.17 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8ILK3 (Residues: 4-158; Coverage: 96%)
Gene name: PF3D7_1426000
Sequence domains: Ribosomal protein L21e
60S ribosomal protein L41 Chain: Ag
Molecule details ›
Chain: Ag
Length: 37 amino acids
Theoretical weight: 4.91 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: C6S3G4 (Residues: 3-39; Coverage: 95%)
Gene name: PF3D7_1144300
Sequence domains: Ribosomal protein L41
Large ribosomal subunit protein eL22 Chain: AX
Molecule details ›
Chain: AX
Length: 97 amino acids
Theoretical weight: 11.68 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IB51 (Residues: 40-136; Coverage: 70%)
Gene name: PF3D7_0821700
Sequence domains: Ribosomal L22e protein family
60S ribosomal protein L24, putative Chain: A0
Molecule details ›
Chain: A0
Length: 62 amino acids
Theoretical weight: 7.38 KDa
Source organism: Plasmodium falciparum 3D7
UniProt:
  • Canonical: Q8IEM3 (Residues: 8-69; Coverage: 38%)
Gene name: PF3D7_1309100
Sequence domains: Ribosomal protein L24e
18S Ribosomal RNA Chain: A
Molecule details ›
Chain: A
Length: 1608 nucleotides
Theoretical weight: 517.98 KDa
Sequence domains: Eukaryotic small subunit ribosomal RNA
E-tRNA Chain: 7
Molecule details ›
Chain: 7
Length: 74 nucleotides
Theoretical weight: 23.77 KDa
Sequence domains: tRNA
28S ribosomal RNA Chain: AA
Molecule details ›
Chain: AA
Length: 3193 nucleotides
Theoretical weight: 1027.64 KDa
Sequence domains: Eukaryotic large subunit ribosomal RNA
5.8S ribosomal RNA Chain: AC
Molecule details ›
Chain: AC
Length: 151 nucleotides
Theoretical weight: 48.66 KDa
Sequence domains: 5.8S ribosomal RNA
5S ribosomal RNA Chain: AB
Molecule details ›
Chain: AB
Length: 118 nucleotides
Theoretical weight: 38.1 KDa
Sequence domains: 5S ribosomal RNA

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 6.7Å
Relevant EMDB volumes: EMD-6454

Quick links

Citations

8 review citations

Translational regulation in blood stages of the malaria parasite Plasmodium spp.: systems-wide studies pave the way.
Vembar et al. (2016)
7 more

1 mention without citation

Dynamical features of the Plasmodium falciparum ribosome during translation.
Sun et al. (2015)