3vhl

X-ray diffraction
2.08Å resolution

Crystal structure of the DHR-2 domain of DOCK8 in complex with Cdc42 (T17N mutant)

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-158139 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Dedicator of cytokinesis protein 8 Chain: A
Molecule details ›
Chain: A
Length: 288 amino acids
Theoretical weight: 33.79 KDa
Source organism: Mus musculus
Expression system: cell-free protein synthsis
UniProt:
  • Canonical: Q8C147 (Residues: 1787-2067; Coverage: 13%)
Gene name: Dock8
Sequence domains:
Structure domains: Methane Monooxygenase Hydroxylase; Chain G, domain 1
Cell division control protein 42 homolog Chain: B
Molecule details ›
Chain: B
Length: 195 amino acids
Theoretical weight: 21.47 KDa
Source organism: Homo sapiens
Expression system: cell-free protein synthsis
UniProt:
  • Canonical: P60953 (Residues: 1-188; Coverage: 98%)
Gene name: CDC42
Sequence domains: Ras family
Structure domains: P-loop containing nucleotide triphosphate hydrolases

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE AR-NW12A
Spacegroup: C2
Unit cell:
a: 104.185Å b: 73.279Å c: 65.031Å
α: 90° β: 104.82° γ: 90°
R-values:
R R work R free
0.182 0.178 0.232
Expression system: cell-free protein synthsis