› 3vi6

X-ray diffraction
1.59Å resolution

Crystal Structure of human ribosomal protein L30e

Released:
DOI: 10.2210/pdb3vi6/pdb
PDB entry 3vi6 coloured by chain, front view.
PDB entry 3vi6 coloured by chain, side view.
PDB entry 3vi6 coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Crystallization and preliminary X-ray structure analysis of human ribosomal protein L30e.
Kawaguchi A, Ose T, Yao M, Tanaka I
Acta Crystallogr Sect F Struct Biol Cryst Commun 67 1516-8 (2011)
PMID: 22139155

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo trimer
Assembly name:
PDBe Complex ID:
PDB-CPX-158756 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Large ribosomal subunit protein eL30 Chain: A
Molecule details ›
Chain: A
Length: 125 amino acids
Theoretical weight: 13.92 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P62888 (Residues: 1-115; Coverage: 100%)
Gene name: RPL30
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Structure domains: 60s Ribosomal Protein L30; Chain: A;

Ligands and Environments

1 bound ligand:
Ligand FMT 1 x FMT
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE AR-NW12A
Spacegroup: R32
Unit cell:
a: 56.282Å b: 56.282Å c: 203.628Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.191 0.19 0.216
Expression system: Escherichia coli

Quick links

Citations

1 citations in other articles

The Bacillus subtilis open reading frame ysgA encodes the SPOUT methyltransferase RlmP forming 2'-O-methylguanosine at position 2553 in the A-loop of 23S rRNA.
Roovers et al. (2022)

3 mentions without citation

The dipeptidyl peptidase IV inhibitors vildagliptin and K-579 inhibit a phospholipase C: a case of promiscuous scaffolds in proteins.
Chakraborty et al. (2013)
2 more