› 3do0

X-ray diffraction
1.36Å resolution

Thermolysin by classical hanging drop method after high X-Ray dose on esrf ID14-2 beamline

Released:
DOI: 10.2210/pdb3do0/pdb
PDB entry 3do0 coloured by chain, front view.
PDB entry 3do0 coloured by chain, side view.
PDB entry 3do0 coloured by chain, top view.
Source organism: Bacillus thermoproteolyticus
Entry authors: Pechkova E, Tripathi SK, Nicolini C

Function and Biology Details

Reaction catalysed: 
Preferential cleavage: -|-Leu > -|-Phe.
Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-133580 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Thermolysin Chain: A
Molecule details ›
Chain: A
Length: 316 amino acids
Theoretical weight: 34.36 KDa
Source organism: Bacillus thermoproteolyticus
UniProt:
  • Canonical: P00800 (Residues: 233-548; Coverage: 61%)
Gene name: npr
Sequence domains:
Structure domains:

Ligands and Environments

4 bound ligands:
Ligand CA 4 x CA
Ligand ZN 1 x ZN
Ligand VAL 1 x VAL
Ligand LYS 1 x LYS
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID14-2
Spacegroup: P6122
Unit cell:
a: 92.724Å b: 92.724Å c: 128.6Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.224 0.223 0.255

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