› 3f2e

X-ray diffraction
1.67Å resolution

Crystal structure of Yellowstone SIRV coat protein C-terminus

Released:
DOI: 10.2210/pdb3f2e/pdb
PDB entry 3f2e coloured by chain, front view.
PDB entry 3f2e coloured by chain, side view.
PDB entry 3f2e coloured by chain, top view.
Source organism: Rudivirus
Primary publication:
Synergy of NMR, computation, and X-ray crystallography for structural biology.
Szymczyna BR, Taurog RE, Young MJ, Snyder JC, Johnson JE, Williamson JR
Structure 17 499-507 (2009)
PMID: 19368883

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-112187 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Sulfolobus virus coat protein C-terminal domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 100 amino acids
Theoretical weight: 10.5 KDa
Source organism: Rudivirus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: D0VX05 (Residues: 1-100; Coverage: 100%)
Sequence domains: Sulfolobus virus coat protein C terminal
Structure domains: Methane Monooxygenase Hydroxylase; Chain G, domain 1

Ligands and Environments

1 bound ligand:
Ligand CIT 1 x CIT
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU FR-D
Spacegroup: P43212
Unit cell:
a: 54.41Å b: 54.41Å c: 77.79Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.185 0.184 0.202
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

15 review citations

Ion mobility mass spectrometry of proteins and protein assemblies.
Uetrecht et al. (2010)
14 more

5 mentions without citation

A survey of protein structures from archaeal viruses.
Dellas et al. (2013)
4 more