› 3fkh

X-ray diffraction
2.51Å resolution

Crystal structure of Putative pyridoxamine 5'-phosphate oxidase (NP_601736.1) from CORYNEBACTERIUM GLUTAMICUM ATCC 13032 KITASATO at 2.51 A resolution

Released:
DOI: 10.2210/pdb3fkh/pdb
PDB entry 3fkh coloured by chain, front view.
PDB entry 3fkh coloured by chain, side view.
PDB entry 3fkh coloured by chain, top view.
Source organism: Corynebacterium glutamicum ATCC 13032
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-163553 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative pyridoxamine 5'-phosphate oxidase Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 138 amino acids
Theoretical weight: 15.99 KDa
Source organism: Corynebacterium glutamicum ATCC 13032
Expression system: Escherichia coli
Structure domains: Electron Transport, Fmn-binding Protein; Chain A

Ligands and Environments

3 bound ligands:
Ligand P33 5 x P33
Ligand CA 1 x CA
Ligand GOL 3 x GOL
1 modified residue:
Ligand MSE 18 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-B
Spacegroup: P212121
Unit cell:
a: 74.63Å b: 88.31Å c: 138.17Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.245 0.243 0.287
Expression system: Escherichia coli

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