› 3gf7

X-ray diffraction
2.4Å resolution

Glutaconyl-coA decarboxylase A subunit from Clostridium symbiosum apoprotein

Released:
DOI: 10.2210/pdb3gf7/pdb
PDB entry 3gf7 coloured by chain, front view.
PDB entry 3gf7 coloured by chain, side view.
PDB entry 3gf7 coloured by chain, top view.
Source organism: [Clostridium] symbiosum
Primary publication:
An asymmetric model for Na+-translocating glutaconyl-CoA decarboxylases.
Kress D, Brügel D, Schall I, Linder D, Buckel W, Essen LO
J Biol Chem 284 28401-28409 (2009)
PMID: 19654317

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-110602 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glutaconyl-CoA decarboxylase subunit A Chain: A
Molecule details ›
Chain: A
Length: 588 amino acids
Theoretical weight: 65.02 KDa
Source organism: [Clostridium] symbiosum
Expression system: Escherichia coli
UniProt:
  • Canonical: B7TVP1 (Residues: 1-588; Coverage: 100%)
Gene name: gcdA
Sequence domains: Carboxyl transferase domain
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand SO4 1 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X13
Spacegroup: F222
Unit cell:
a: 102.05Å b: 143.53Å c: 167.52Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.187 0.185 0.225
Expression system: Escherichia coli

Quick links

Citations

2 review citations

Structure and function of biotin-dependent carboxylases.
Tong L. (2013)
1 more

1 mention without citation

An asymmetric model for Na+-translocating glutaconyl-CoA decarboxylases.
Kress et al. (2009)