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Fitting of the gp6 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 dome-shaped baseplate

Electron Microscopy
12Å resolution
PDB entry 3h3w coloured by chain, front view.
PDB entry 3h3w coloured by chain, side view.
PDB entry 3h3w coloured by chain, top view.
Source organism: Escherichia virus T4
Assembly composition:
homo dodecamer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Baseplate wedge protein gp6
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Multimeric state: homo dodecamer
Accessible surface area: 189738.32 Å2
Buried surface area: 15761.11 Å2
Dissociation area: 7,880.55 Å2
Dissociation energy (ΔGdiss): -59.74 kcal/mol
Dissociation entropy (TΔSdiss): 161.6 kcal/mol
Symmetry number: 6
PDBe Complex ID: PDB-CPX-148485

Macromolecules

Baseplate wedge protein gp6
Chains: A, B, C, D, E, F, G, H, I, J, K, L
Length: 335 amino acids
Theoretical weight: 38.3 KDa
Source organism: Escherichia virus T4
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P19060 (Residues: 334-660; Coverage: 50%)
Gene name: 6
Pfam:
Baseplate wedge protein gp6 in PDB entry 3h3w, assembly 1, front view.
Baseplate wedge protein gp6 in PDB entry 3h3w, assembly 1, side view.
Baseplate wedge protein gp6 in PDB entry 3h3w, assembly 1, top view.
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