3ikm

X-ray diffraction
3.24Å resolution

Crystal structure of human mitochondrial DNA polymerase holoenzyme

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-156941 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
DNA polymerase subunit gamma-1 Chains: A, D
Molecule details ›
Chains: A, D
Length: 1172 amino acids
Theoretical weight: 132.38 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P54098 (Residues: 70-355, 356-1239; Coverage: 94%)
Gene names: MDP1, POLG, POLG1, POLGA
Sequence domains: DNA mitochondrial polymerase exonuclease domain
Structure domains:
DNA polymerase subunit gamma-2 Chains: B, C, E, F
Molecule details ›
Chains: B, C, E, F
Length: 427 amino acids
Theoretical weight: 48.76 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9UHN1 (Residues: 59-485; Coverage: 88%)
Gene names: MTPOLB, POLG2
Sequence domains: Anticodon binding domain
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P32
Unit cell:
a: 138.394Å b: 138.394Å c: 226.312Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.284 0.284 0.303