3j9x

Electron Microscopy
3.8Å resolution

A Virus that Infects a Hyperthermophile Encapsidates A-Form DNA

Released:

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
hetero 60-mer (preferred)
PDBe Complex ID:
PDB-CPX-116424 (preferred)
Entry contents:
1 distinct polypeptide molecule
1 distinct DNA molecule
Macromolecules (2 distinct):
Major capsid protein Chains: 1, 2, 3, 4, 5, 6, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t, u, v, w, x, y, z
Molecule details ›
Chains: 1, 2, 3, 4, 5, 6, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t, u, v, w, x, y, z
Length: 128 amino acids
Theoretical weight: 13.76 KDa
Source organism: Sulfolobus islandicus rod-shaped virus 2
UniProt:
  • Canonical: Q8V9P2 (Residues: 7-134; Coverage: 96%)
Sequence domains: Sulfolobus virus coat protein C terminal
Structure domains: Methane Monooxygenase Hydroxylase; Chain G, domain 1
DNA Chains: 7, 8
Molecule details ›
Chains: 7, 8
Length: 348 nucleotides
Theoretical weight: 107.38 KDa
Source organism: Sulfolobus islandicus rod-shaped virus 2

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.8Å
Relevant EMDB volumes: EMD-6310