› 3jcx

Electron Microscopy
4.1Å resolution

Canine Parvovirus complexed with Fab E

Released:
DOI: 10.2210/pdb3jcx/pdb
PDB entry 3jcx coloured by chain, front view.
PDB entry 3jcx coloured by chain, side view.
PDB entry 3jcx coloured by chain, top view.
Source organisms:
Primary publication:
Near-Atomic Resolution Structure of a Highly Neutralizing Fab Bound to Canine Parvovirus.
Organtini LJ, Lee H, Iketani S, Huang K, Ashley RE, Makhov AM, Conway JF, Parrish CR, Hafenstein S
J Virol 90 9733-9742 (2016)
PMID: 27535057
Related structures: EMD-6629

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero 180-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-207650 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Parvovirus coat protein VP2 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 584 amino acids
Theoretical weight: 64.78 KDa
Source organism: Canine parvovirus
UniProt:
  • Canonical: B2ZG07 (Residues: 1-584; Coverage: 100%)
Sequence domains: Parvovirus coat protein VP2
Fab E heavy chain Chain: H
Molecule details ›
Chain: H
Length: 115 amino acids
Theoretical weight: 12.74 KDa
Source organism: Rattus norvegicus
Fab E light chain Chain: L
Molecule details ›
Chain: L
Length: 107 amino acids
Theoretical weight: 11.75 KDa
Source organism: Rattus norvegicus

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.1Å
Relevant EMDB volumes: EMD-6629

Quick links

Citations

4 review citations

Parvovirus Capsid-Antibody Complex Structures Reveal Conservation of Antigenic Epitopes Across the Family.
Emmanuel et al. (2021)
3 more

2 mentions without citation

Near-Atomic Resolution Structure of a Highly Neutralizing Fab Bound to Canine Parvovirus.
Organtini et al. (2016)
1 more