3jro

X-ray diffraction
4Å resolution

NUP84-NUP145C-SEC13 edge element of the NPC lattice

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-155987 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Nucleoporin NUP145C; Protein transport protein SEC13 Chain: A
Molecule details ›
Chain: A
Length: 753 amino acids
Theoretical weight: 85.36 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
  • Canonical: Q04491 (Residues: 1-297; Coverage: 100%)
  • Canonical: P49687 (Residues: 714-1160; Coverage: 34%)
Gene names: ANU3, L8167.4, NUP145, RAT10, SEC13, YGL092W, YLR208W
Sequence domains:
Structure domains: YVTN repeat-like/Quinoprotein amine dehydrogenase
Nucleoporin NUP84 Chain: C
Molecule details ›
Chain: C
Length: 426 amino acids
Theoretical weight: 49.25 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P52891 (Residues: 1-424; Coverage: 58%)
Gene names: NUP84, YDL116W
Sequence domains: Nuclear pore protein 84 / 107
Structure domains: Hyaluronidase domain-like

Ligands and Environments

No bound ligands
1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-C
Spacegroup: P6222
Unit cell:
a: 170.472Å b: 170.472Å c: 270.732Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.286 0.282 0.329
Expression system: Escherichia coli