› 3kc2

X-ray diffraction
1.55Å resolution

Crystal structure of mitochondrial HAD-like phosphatase from Saccharomyces cerevisiae

Released:
DOI: 10.2210/pdb3kc2/pdb
PDB entry 3kc2 coloured by chain, front view.
PDB entry 3kc2 coloured by chain, side view.
PDB entry 3kc2 coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Entry authors: Nocek B, Evdokimova E, Kuznetsova K, Iakunine A, Savchenko A, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-153136 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Mitochondrial hydrolase YKR070W Chains: A, B
Molecule details ›
Chains: A, B
Length: 352 amino acids
Theoretical weight: 39.64 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P36151 (Residues: 1-352; Coverage: 100%)
Gene name: YKR070W
Sequence domains:
Structure domains: HAD superfamily/HAD-like

Ligands and Environments

2 bound ligands:
Ligand PO4 4 x PO4
Ligand MG 3 x MG
1 modified residue:
Ligand MSE 8 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: C2
Unit cell:
a: 143.734Å b: 67.095Å c: 76.899Å
α: 90° β: 110.45° γ: 90°
R-values:
R R work R free
0.145 0.144 0.169
Expression system: Escherichia coli

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