› 3lax

X-ray diffraction
1.43Å resolution

The crystal structure of a domain of phenylacetate-coenzyme A ligase from Bacteroides vulgatus ATCC 8482

Released:
DOI: 10.2210/pdb3lax/pdb
PDB entry 3lax coloured by chain, front view.
PDB entry 3lax coloured by chain, side view.
PDB entry 3lax coloured by chain, top view.
Source organism: Phocaeicola vulgatus ATCC 8482
Entry authors: Tan K, Wu R, Cobb G, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Reaction catalysed: 
ATP + phenylacetate + CoA = AMP + diphosphate + phenylacetyl-CoA
Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107870 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Phenylacetate-coenzyme A ligase Chain: A
Molecule details ›
Chain: A
Length: 109 amino acids
Theoretical weight: 12.47 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli
UniProt:
  • Canonical: A6L0Y5 (Residues: 327-432; Coverage: 25%)
Gene name: BVU_1668
Sequence domains: AMP-binding enzyme C-terminal domain
Structure domains: GMP Synthetase; Chain A, domain 3

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 2 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P212121
Unit cell:
a: 33.737Å b: 44.334Å c: 67.601Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.177 0.174 0.225
Expression system: Escherichia coli

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