› 3lup

X-ray diffraction
2.65Å resolution

Crystal structure of fatty acid binding DegV family protein SAG1342 from Streptococcus agalactiae

Released:
DOI: 10.2210/pdb3lup/pdb
PDB entry 3lup coloured by chain, front view.
PDB entry 3lup coloured by chain, side view.
PDB entry 3lup coloured by chain, top view.
Source organism: Streptococcus agalactiae 2603V/R
Entry authors: Chang C, Wu R, Clancy S, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-112614 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DegV family protein Chain: A
Molecule details ›
Chain: A
Length: 285 amino acids
Theoretical weight: 31.6 KDa
Source organism: Streptococcus agalactiae 2603V/R
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: D4AEP8 (Residues: 4-285; Coverage: 99%)
Gene name: SAG1342
Sequence domains: Uncharacterised protein, DegV family COG1307
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand ELA 1 x ELA
Ligand GOL 1 x GOL
1 modified residue:
Ligand MSE 4 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P212121
Unit cell:
a: 39.321Å b: 84.205Å c: 87.541Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.2 0.197 0.265
Expression system: Escherichia coli BL21(DE3)

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