› 3lyy

X-ray diffraction
1.9Å resolution

Crystal structure of the MucBP domain of the adhesion protein PEPE_0118 from Pediococcus pentosaceus. Northeast Structural Genomics Consortium target id PtR41A

Released:
DOI: 10.2210/pdb3lyy/pdb
PDB entry 3lyy coloured by chain, front view.
PDB entry 3lyy coloured by chain, side view.
PDB entry 3lyy coloured by chain, top view.
Source organism: Pediococcus pentosaceus ATCC 25745
Entry authors: Seetharaman J, Lew S, Wang D, Janjua H, Cunningham K, Owens L, Xiao R, Liu J, Baran MC, Acton TB, Montelione GT, Tong L, Hunt JF, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-169968 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Gram-positive cocci surface proteins LPxTG domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 107 amino acids
Theoretical weight: 11.54 KDa
Source organism: Pediococcus pentosaceus ATCC 25745
Expression system: Escherichia coli
UniProt:
  • Canonical: Q03HU7 (Residues: 796-902; Coverage: 4%)
Gene name: PEPE_0118
Sequence domains: Muc B2-like domain
Structure domains: Immunoglobulin-like

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 2 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4A
Spacegroup: P62
Unit cell:
a: 90.634Å b: 90.634Å c: 56.991Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.194 0.194 0.239
Expression system: Escherichia coli

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