› 3my7

X-ray diffraction
2.3Å resolution

The Crystal Structure of the ACDH domain of an Alcohol Dehydrogenase from Vibrio parahaemolyticus to 2.25A

Released:
DOI: 10.2210/pdb3my7/pdb
PDB entry 3my7 coloured by chain, front view.
PDB entry 3my7 coloured by chain, side view.
PDB entry 3my7 coloured by chain, top view.
Source organism: Vibrio parahaemolyticus RIMD 2210633
Entry authors: Stein AJ, Weger A, Volkart L, Gu M, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183346 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Aldehyde-alcohol dehydrogenase Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 452 amino acids
Theoretical weight: 48.74 KDa
Source organism: Vibrio parahaemolyticus RIMD 2210633
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q87MW0 (Residues: 1-452; Coverage: 50%)
Gene name: VP2121
Sequence domains: Aldehyde dehydrogenase family
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand CL 4 x CL
1 modified residue:
Ligand MSE 52 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P21
Unit cell:
a: 66.654Å b: 145.489Å c: 91.986Å
α: 90° β: 105.81° γ: 90°
R-values:
R R work R free
0.232 0.229 0.281
Expression system: Escherichia coli BL21(DE3)

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