› 3p0s

X-ray diffraction
3.1Å resolution

Crystal structure of Bombyx mori densovirus 1 capsid

Released:
DOI: 10.2210/pdb3p0s/pdb
PDB entry 3p0s coloured by chain, front view.
PDB entry 3p0s coloured by chain, side view.
PDB entry 3p0s coloured by chain, top view.
Source organism: Bombyx mori densovirus 1
Primary publication:
Structure of Bombyx mori densovirus 1, a silkworm pathogen.
Kaufmann B, El-Far M, Plevka P, Bowman VD, Li Y, Tijssen P, Rossmann MG
J Virol 85 4691-7 (2011)
PMID: 21367906

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo 60-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-186537 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein VP Chain: A
Molecule details ›
Chain: A
Length: 494 amino acids
Theoretical weight: 54.99 KDa
Source organism: Bombyx mori densovirus 1
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q8V0M6 (Residues: 179-672; Coverage: 74%)
Sequence domains: Parvovirus non-structural protein NS1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 14-ID-B
Spacegroup: P1
Unit cell:
a: 245.4Å b: 245.6Å c: 245.7Å
α: 59.98° β: 67.93° γ: 72.27°
R-values:
R R work R free
0.209 0.209 not available
Expression system: Trichoplusia ni

Quick links

Citations

1 review citation

Structure of viruses: a short history.
Rossmann MG. (2013)
5 other articles

10 mentions without citation

Twenty-Five Years of Structural Parvovirology.
Mietzsch et al. (2019)
9 more