› 3p4j

X-ray diffraction
0.55Å resolution

Ultra-high resolution structure of d(CGCGCG)2 Z-DNA

Released:
DOI: 10.2210/pdb3p4j/pdb
PDB entry 3p4j coloured by chain, front view.
PDB entry 3p4j coloured by chain, side view.
PDB entry 3p4j coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
High regularity of Z-DNA revealed by ultra high-resolution crystal structure at 0.55 A.
Brzezinski K, Brzuszkiewicz A, Dauter M, Kubicki M, Jaskolski M, Dauter Z
Nucleic Acids Res 39 6238-48 (2011)
PMID: 21459852

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-116692 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*CP*GP*CP*GP*CP*G)-3') Chains: A, B
Molecule details ›
Chains: A, B
Length: 6 nucleotides
Theoretical weight: 1.81 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand SPM 1 x SPM
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-C
Spacegroup: P212121
Unit cell:
a: 17.88Å b: 31.42Å c: 43.9Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.08 0.078 0.085
Expression system: Not provided

Quick links

Citations

2 review citations

A brief history of macromolecular crystallography, illustrated by a family tree and its Nobel fruits.
Jaskolski et al. (2014)
1 more

21 mentions without citation

Protein crystallography for aspiring crystallographers or how to avoid pitfalls and traps in macromolecular structure determination.
Wlodawer et al. (2013)
20 more