3wao

X-ray diffraction
2.6Å resolution

Crystal structure of Atg13 LIR-fused human LC3B_2-119

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-130844 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Autophagy-related protein 13; Microtubule-associated proteins 1A/1B light chain 3B Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 134 amino acids
Theoretical weight: 15.56 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: O75143 (Residues: 436-447; Coverage: 2%)
  • Canonical: Q9GZQ8 (Residues: 2-119; Coverage: 94%)
Gene names: ATG13, KIAA0652, MAP1ALC3, MAP1LC3B
Sequence domains: Autophagy protein Atg8 ubiquitin like
Structure domains: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE BL-17A
Spacegroup: P41
Unit cell:
a: 64.569Å b: 64.569Å c: 130.332Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.226 0.223 0.294
Expression system: Escherichia coli