› 436d

X-ray diffraction
1.1Å resolution

THE DICKERSON-DREW B-DNA DODECAMER REVISITED-AT ATOMIC RESOLUTION

Released:
DOI: 10.2210/pdb436d/pdb
PDB entry 436d coloured by chain, front view.
PDB entry 436d coloured by chain, side view.
PDB entry 436d coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
The Dickerson-Drew B-DNA Dodecamer Revisited-At Atomic Resolution
Tereshko V, Minasov G, Egli M
J. Am. Chem. Soc. 121 470-471 (1999)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-117146 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3' Chains: A, B
Molecule details ›
Chains: A, B
Length: 12 nucleotides
Theoretical weight: 3.68 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand MG 5 x MG
1 modified residue:
Ligand TAF 2 x TAF

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 14-BM-C
Spacegroup: P212121
Unit cell:
a: 24.64Å b: 39.63Å c: 65.53Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.162 not available not available
Expression system: Not provided

Quick links

Citations

9 mentions without citation

How the misincorporation of ribonucleotides into genomic DNA can be both harmful and helpful to cells.
Potenski et al. (2014)
8 more