4dpg

X-ray diffraction
2.84Å resolution

Crystal Structure of Human LysRS: P38/AIMP2 Complex I

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-171573 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Lysine--tRNA ligase Chains: A, B, C, D, E, F, G, H
Molecule details ›
Chains: A, B, C, D, E, F, G, H
Length: 513 amino acids
Theoretical weight: 59.24 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q15046 (Residues: 70-581; Coverage: 86%)
Gene names: KARS, KARS1, KIAA0070
Sequence domains:
Structure domains:
Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 Chains: I, J, K, L
Molecule details ›
Chains: I, J, K, L
Length: 54 amino acids
Theoretical weight: 6.07 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q13155 (Residues: 1-48; Coverage: 15%)
Gene names: AIMP2, JTV1, PRO0992
Sequence domains: AIMP2 lysyl-tRNA synthetase binding domain

Ligands and Environments

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-F
Spacegroup: P1
Unit cell:
a: 79.2Å b: 122.01Å c: 149.2Å
α: 89.16° β: 85.58° γ: 89.71°
R-values:
R R work R free
0.187 0.185 0.223
Expression system: Escherichia coli