4odp

X-ray diffraction
1.75Å resolution

Structure of SlyD delta-IF from Thermus thermophilus in complex with S2-W23A peptide

Released:

Function and Biology Details

Reaction catalysed:
Peptidylproline (omega=180) = peptidylproline (omega=0)
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-141624 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Peptidyl-prolyl cis-trans isomerase; Peptidyl-prolyl cis-trans isomerase FKBP1A Chain: A
Molecule details ›
Chain: A
Length: 110 amino acids
Theoretical weight: 12.18 KDa
Source organisms: Expression system: Escherichia coli
UniProt:
  • Canonical: Q5SLE7 (Residues: 1-64, 127-149; Coverage: 58%)
  • Canonical: P62942 (Residues: 85-98; Coverage: 13%)
Gene names: FKBP1, FKBP12, FKBP1A, TTHA0346
Sequence domains: FKBP-type peptidyl-prolyl cis-trans isomerase
Structure domains: Chitinase A; domain 3
Small ribosomal subunit protein uS2 Chain: B
Molecule details ›
Chain: B
Length: 16 amino acids
Theoretical weight: 1.74 KDa
Source organism: Escherichia coli K-12
Expression system: Not provided
UniProt:
  • Canonical: P0A7V0 (Residues: 20-34; Coverage: 6%)
Gene names: JW0164, b0169, rpsB

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I24
Spacegroup: P4132
Unit cell:
a: 93.69Å b: 93.69Å c: 93.69Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.185 0.184 0.202
Expression systems:
  • Escherichia coli
  • Not provided