› 4of8

X-ray diffraction
1.9Å resolution

Crystal Structure of Rst D1-D2

Released:
DOI: 10.2210/pdb4of8/pdb
PDB entry 4of8 coloured by chain, front view.
PDB entry 4of8 coloured by chain, side view.
PDB entry 4of8 coloured by chain, top view.
Source organism: Drosophila melanogaster
Primary publication:
Extracellular architecture of the SYG-1/SYG-2 adhesion complex instructs synaptogenesis.
Özkan E, Chia PH, Wang RR, Goriatcheva N, Borek D, Otwinowski Z, Walz T, Shen K, Garcia KC
Cell 156 482-94 (2014)
PMID: 24485456

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-170603 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Irregular chiasm C-roughest protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 228 amino acids
Theoretical weight: 25.53 KDa
Source organism: Drosophila melanogaster
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q08180 (Residues: 20-237; Coverage: 29%)
Gene names: CG4125, rst
Sequence domains:
Structure domains: Immunoglobulins

Ligands and Environments

2 bound ligands:
Ligand NA 4 x NA
Ligand GOL 6 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.2
Spacegroup: P21
Unit cell:
a: 59.941Å b: 77.935Å c: 121.097Å
α: 90° β: 95.44° γ: 90°
R-values:
R R work R free
0.175 0.173 0.208
Expression system: Trichoplusia ni

Quick links

Citations

16 review citations

Mechanisms of myoblast fusion during muscle development.
Kim et al. (2015)
15 more

1 mention without citation

Probing the intermolecular interactions of PPARγ-LBD with polyunsaturated fatty acids and their anti-inflammatory metabolites to infer most potential binding moieties.
Muralikumar et al. (2017)