4ycu

X-ray diffraction
2.1Å resolution

Crystal structure of cladosporin in complex with human lysyl-tRNA synthetase

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-171575 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Lysine--tRNA ligase Chains: A, B
Molecule details ›
Chains: A, B
Length: 513 amino acids
Theoretical weight: 59.24 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q15046 (Residues: 70-581; Coverage: 86%)
Gene names: KARS, KARS1, KIAA0070
Sequence domains:
Structure domains:
Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 Chain: C
Molecule details ›
Chain: C
Length: 42 amino acids
Theoretical weight: 4.91 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q13155 (Residues: 1-36; Coverage: 11%)
Gene names: AIMP2, JTV1, PRO0992
Sequence domains: AIMP2 lysyl-tRNA synthetase binding domain

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-F
Spacegroup: C2221
Unit cell:
a: 96.194Å b: 99.847Å c: 268.987Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.192 0.191 0.213
Expression system: Escherichia coli