4ymd

X-ray diffraction
2.87Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-189776 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
Collectin-11 Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 155 amino acids
Theoretical weight: 17.31 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9BWP8 (Residues: 116-270; Coverage: 63%)
Gene names: COLEC11, UNQ596/PRO1182
Sequence domains: Lectin C-type domain
Structure domains: Mannose-Binding Protein A, subunit A

Ligands and Environments

Carbohydrate polymer : NEW Components: MAN
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04-1
Spacegroup: P21
Unit cell:
a: 71.85Å b: 106.65Å c: 78.39Å
α: 90° β: 92.17° γ: 90°
R-values:
R R work R free
0.216 0.213 0.264
Expression system: Escherichia coli BL21(DE3)