› 4cw8

X-ray diffraction
2.3Å resolution

Structure of the carboxy-terminal domain of the turkey type 3 siadenovirus fibre, virulent form

Released:
DOI: 10.2210/pdb4cw8/pdb
PDB entry 4cw8 coloured by chain, front view.
PDB entry 4cw8 coloured by chain, side view.
PDB entry 4cw8 coloured by chain, top view.
Source organism: Turkey adenovirus 3
Primary publication:
Structure and Sialyllactose Binding of the Carboxy-Terminal Head Domain of the Fibre from a Siadenovirus, Turkey Adenovirus 3.
Singh AK, Berbís MÁ, Ballmann MZ, Kilcoyne M, Menéndez M, Nguyen TH, Joshi L, Cañada FJ, Jiménez-Barbero J, Benkő M, Harrach B, van Raaij MJ
PLoS One 10 e0139339 (2015)
PMID: 26418008

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-170930 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Fiber knob domain Chain: A
Molecule details ›
Chain: A
Length: 190 amino acids
Theoretical weight: 20.84 KDa
Source organism: Turkey adenovirus 3
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q0GF90 (Residues: 12-165; Coverage: 93%)
Structure domains: Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)

Ligands and Environments

1 bound ligand:
Ligand PO4 2 x PO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALBA BEAMLINE XALOC
Spacegroup: I23
Unit cell:
a: 98.963Å b: 98.963Å c: 98.963Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.199 0.197 0.239
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

3 review citations

Glycomics and Proteomics Approaches to Investigate Early Adenovirus-Host Cell Interactions.
Lasswitz et al. (2018)
2 more

4 mentions without citation

Adenovirus Structure: What Is New?
Gallardo et al. (2021)
3 more