› 4idx

X-ray diffraction
3.21Å resolution

hexameric crystal structure of Schmallenberg virus nucleoprotein

Released:
DOI: 10.2210/pdb4idx/pdb
PDB entry 4idx coloured by chain, front view.
PDB entry 4idx coloured by chain, side view.
PDB entry 4idx coloured by chain, top view.
Source organism: Schmallenberg virus
Primary publication:
Structure of Schmallenberg orthobunyavirus nucleoprotein suggests a novel mechanism of genome encapsidation.
Dong H, Li P, Elliott RM, Dong C
J Virol 87 5593-601 (2013)
PMID: 23468499

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assemblies composition:
homo trimer
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-124734 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nucleoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 233 amino acids
Theoretical weight: 26.21 KDa
Source organism: Schmallenberg virus
Expression system: Escherichia coli
UniProt:
  • Canonical: H2AM13 (Residues: 1-233; Coverage: 100%)
Gene name: N
Sequence domains: Bunyavirus nucleocapsid (N) protein
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I24
Spacegroup: I422
Unit cell:
a: 159.2Å b: 159.2Å c: 157.8Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.324 0.321 0.374
Expression system: Escherichia coli

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Citations

10 review citations

Orthobunyaviruses: recent genetic and structural insights.
Elliott RM. (2014)
9 more

2 mentions without citation

Structure of Schmallenberg orthobunyavirus nucleoprotein suggests a novel mechanism of genome encapsidation.
Dong et al. (2013)
1 more