› 4ii1

X-ray diffraction
2.65Å resolution

Crystal structure of the zinc finger of ZGPAT

Released:
DOI: 10.2210/pdb4ii1/pdb
PDB entry 4ii1 coloured by chain, front view.
PDB entry 4ii1 coloured by chain, side view.
PDB entry 4ii1 coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Bian C, Tempel W, Dong A, Chao X, Fu M, Wernimont AK, Bountra C, Weigelt J, Arrowsmith CH, Edwards AM, Min J, Structural Genomics Consortium (SGC)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-185402 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Zinc finger CCCH-type with G patch domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 167 amino acids
Theoretical weight: 18.78 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q8N5A5 (Residues: 120-268; Coverage: 28%)
Gene names: GPATC6, GPATCH6, KIAA1847, ZC3H9, ZC3HDC9, ZGPAT, ZIP
Sequence domains: CCCH-type zinc finger
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand ZN 4 x ZN
Ligand UNX 19 x UNX
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-B
Spacegroup: P21
Unit cell:
a: 55.17Å b: 87.07Å c: 76.57Å
α: 90° β: 95.65° γ: 90°
R-values:
R R work R free
0.21 0.208 0.242
Expression system: Escherichia coli BL21

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