4m4e

X-ray diffraction
2.6Å resolution

TRAF domain of human TRAF4

Released:
Source organism: Homo sapiens
Primary publication:
Structural biology study of human TNF receptor associated factor 4 TRAF domain.
Protein Cell 4 687-94 (2013)
PMID: 23982741

Function and Biology Details

Reaction catalysed:
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine
Biochemical function:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo trimer (preferred)
PDBe Complex ID:
PDB-CPX-189747 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
TNF receptor-associated factor 4 Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 183 amino acids
Theoretical weight: 21.08 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9BUZ4 (Residues: 292-466; Coverage: 37%)
Gene names: CART1, MLN62, RNF83, TRAF4
Sequence domains: TRAF/meprin, MATH domain
Structure domains: Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: P212121
Unit cell:
a: 57.295Å b: 88.205Å c: 118.425Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.216 0.2 0.277
Expression system: Escherichia coli