4q4f

X-ray diffraction
2.8Å resolution

Crystal structure of LIMP-2 (space group C2)

Released:

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-171907 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (6 distinct):
Lysosome membrane protein 2 Chain: A
Molecule details ›
Chain: A
Length: 416 amino acids
Theoretical weight: 47.73 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:
  • Canonical: Q14108 (Residues: 28-432; Coverage: 85%)
Gene names: CD36L2, LIMP2, LIMPII, SCARB2
Sequence domains: CD36 family

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA, MAN, M6D
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I24
Spacegroup: C2
Unit cell:
a: 89.686Å b: 63.386Å c: 114.375Å
α: 90° β: 102.27° γ: 90°
R-values:
R R work R free
0.22 0.217 0.27
Expression system: Homo sapiens