› 4tzd

X-ray diffraction
3.2Å resolution

Crystal structure of Canavalia maritima lectin (ConM) complexed with interleukin - 1 beta primer

Released:
DOI: 10.2210/pdb4tzd/pdb
PDB entry 4tzd coloured by chain, front view.
PDB entry 4tzd coloured by chain, side view.
PDB entry 4tzd coloured by chain, top view.
Source organisms:
Entry authors: Vieira DBHA, Delatorre P, Rocha BAM, Teixeira CS, Silva-Filho JC, Lima EM, Nobrega RB, Cavada BS

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-118174 (preferred)
Entry contents:
1 distinct polypeptide molecule
2 distinct DNA molecules
Macromolecules (3 distinct):
Concanavalin-A Chains: A, D
Molecule details ›
Chains: A, D
Length: 237 amino acids
Theoretical weight: 25.49 KDa
Source organism: Canavalia lineata
UniProt:
  • Canonical: P81460 (Residues: 1-237; Coverage: 100%)
Sequence domains: Legume lectin domain
Structure domains: Jelly Rolls
DNA (5'-D(P*CP*G)-3') Chain: G
Molecule details ›
Chain: G
Length: 2 nucleotides
Theoretical weight: 573 Da
Source organism: Escherichia coli
Expression system: Not provided
DNA (5'-D(P*TP*C)-3') Chain: H
Molecule details ›
Chain: H
Length: 4 nucleotides
Theoretical weight: 1.17 KDa
Source organism: Escherichia coli
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: LNLS BEAMLINE W01B-MX2
Spacegroup: F23
Unit cell:
a: 192.23Å b: 192.23Å c: 192.23Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.251 0.247 0.315
Expression system: Not provided

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