› 4uds

X-ray diffraction
1.76Å resolution

Crystal structure of MbdR regulator from Azoarcus sp. CIB

Released:
DOI: 10.2210/pdb4uds/pdb
PDB entry 4uds coloured by chain, front view.
PDB entry 4uds coloured by chain, side view.
PDB entry 4uds coloured by chain, top view.
Source organism: Azoarcus sp. CIB
Primary publication:
Unraveling the specific regulation of the central pathway for anaerobic degradation of 3-methylbenzoate.
Juárez JF, Liu H, Zamarro MT, McMahon S, Liu H, Naismith JH, Eberlein C, Boll M, Carmona M, Díaz E
J Biol Chem 290 12165-83 (2015)
PMID: 25795774

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-165216 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
MBDR REGULATOR Chain: A
Molecule details ›
Chain: A
Length: 214 amino acids
Theoretical weight: 24.24 KDa
Source organism: Azoarcus sp. CIB
Expression system: Escherichia coli
Structure domains: Tetracycline Repressor, domain 2

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 8 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: I222
Unit cell:
a: 47.03Å b: 56.21Å c: 143.82Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.194 0.191 0.249
Expression system: Escherichia coli

Quick links

Citations

1 review citation

Sensing new chemicals with bacterial transcription factors.
Libis et al. (2016)
4 other articles

2 mentions without citation

Unraveling the specific regulation of the central pathway for anaerobic degradation of 3-methylbenzoate.
Juárez et al. (2015)
1 more