5cx3

X-ray diffraction
2.3Å resolution

Crystal structure of FYCO1 LIR in complex with LC3A

Released:

Function and Biology Details

Structure analysis Details

Assemblies composition:
hetero tetramer (preferred)
hetero octamer
PDBe Complex ID:
PDB-CPX-189682 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Microtubule-associated proteins 1A/1B light chain 3A Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 121 amino acids
Theoretical weight: 14.29 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9H492 (Residues: 1-121; Coverage: 100%)
Gene name: MAP1LC3A
Sequence domains: Autophagy protein Atg8 ubiquitin like
Structure domains: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1
FYVE and coiled-coil domain-containing protein 1 Chains: E, F, G, H
Molecule details ›
Chains: E, F, G, H
Length: 31 amino acids
Theoretical weight: 3.38 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9BQS8 (Residues: 1273-1298; Coverage: 2%)
Gene names: FYCO1, ZFYVE7

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: P21
Unit cell:
a: 35.426Å b: 115.257Å c: 73.517Å
α: 90° β: 102.29° γ: 90°
R-values:
R R work R free
0.181 0.178 0.244
Expression system: Escherichia coli