› 5eh4

X-ray diffraction
2.81Å resolution

Crystal Structure of the Glycophorin A Transmembrane Dimer in Lipidic Cubic Phase

Released:
DOI: 10.2210/pdb5eh4/pdb
PDB entry 5eh4 coloured by chain, front view.
PDB entry 5eh4 coloured by chain, side view.
PDB entry 5eh4 coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Crystal Structure of the Glycophorin A Transmembrane Dimer in Lipidic Cubic Phase.
Trenker R, Call ME, Call MJ
J Am Chem Soc 137 15676-9 (2015)
PMID: 26642914

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136102 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glycophorin-A Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 30 amino acids
Theoretical weight: 3.29 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P02724 (Residues: 89-117; Coverage: 22%)
Gene names: GPA, GYPA

Ligands and Environments

1 bound ligand:
Ligand OLB 1 x OLB
1 modified residue:
Ligand SCH 4 x SCH

Experiments and Validation Details

Entry percentile scores
X-ray source: AUSTRALIAN SYNCHROTRON BEAMLINE MX2
Spacegroup: P3112
Unit cell:
a: 43.195Å b: 43.195Å c: 129.419Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.232 0.228 0.26
Expression system: Escherichia coli

Quick links

Citations

5 review citations

Emerging Diversity in Lipid-Protein Interactions.
Corradi et al. (2019)
4 more

7 mentions without citation

Membrane receptor activation mechanisms and transmembrane peptide tools to elucidate them.
Westerfield et al. (2020)
6 more