5ms5

X-ray diffraction
1.53Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-238790 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cysteine protease RavZ; Microtubule-associated proteins 1A/1B light chain 3B Chains: A, B
Molecule details ›
Chains: A, B
Length: 137 amino acids
Theoretical weight: 15.97 KDa
Source organisms: Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q5ZUV9 (Residues: 24-36; Coverage: 3%)
  • Canonical: Q9GZQ8 (Residues: 2-119; Coverage: 94%)
Gene names: MAP1ALC3, MAP1LC3B, lpg1683, ravZ
Sequence domains: Autophagy protein Atg8 ubiquitin like
Structure domains: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X10SA
Spacegroup: P43212
Unit cell:
a: 69.61Å b: 69.61Å c: 117.26Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.21 0.208 0.242
Expression system: Escherichia coli BL21