5n88

X-ray diffraction
1.7Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-208147 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
VH59 antibody Chains: A, H
Molecule details ›
Chains: A, H
Length: 126 amino acids
Theoretical weight: 13.89 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
PC4 and SFRS1-interacting protein Chain: D
Molecule details ›
Chain: D
Length: 79 amino acids
Theoretical weight: 9.31 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O75475 (Residues: 347-425; Coverage: 15%)
Gene names: DFS70, LEDGF, PSIP1, PSIP2
Sequence domains: Lens epithelium-derived growth factor (LEDGF)
PC4 and SFRS1-interacting protein Chain: E
Molecule details ›
Chain: E
Length: 80 amino acids
Theoretical weight: 9.34 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O75475 (Residues: 347-424; Coverage: 15%)
Gene names: DFS70, LEDGF, PSIP1, PSIP2
Sequence domains: Lens epithelium-derived growth factor (LEDGF)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04-1
Spacegroup: P1
Unit cell:
a: 35.061Å b: 41.408Å c: 58.66Å
α: 104.04° β: 96.07° γ: 100.49°
R-values:
R R work R free
0.191 0.188 0.252
Expression system: Escherichia coli BL21(DE3)