5nn5

X-ray diffraction
2Å resolution

Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with 1-deoxynojirimycin

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-145218 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (5 distinct):
Lysosomal alpha-glucosidase Chain: A
Molecule details ›
Chain: A
Length: 872 amino acids
Theoretical weight: 96.98 KDa
Source organism: Homo sapiens
Expression system: Cricetulus griseus
UniProt:
  • Canonical: P10253 (Residues: 81-952; Coverage: 94%)
Gene name: GAA
Sequence domains:
Structure domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, FUC
Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID23-2
Spacegroup: P212121
Unit cell:
a: 97.486Å b: 102.972Å c: 129.028Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.185 0.183 0.218
Expression system: Cricetulus griseus