5o9u

X-ray diffraction
1.85Å resolution

HsNMT1 in complex with CoA and Myristoylated-GCSVSKKK octapeptide

Released:

Function and Biology Details

Reaction catalysed:
Tetradecanoyl-CoA + an N-terminal-glycyl-[protein] = CoA + an N-terminal-N-tetradecanoylglycyl-[protein]
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-131340 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Glycylpeptide N-tetradecanoyltransferase 1 Chains: A, B
Molecule details ›
Chains: A, B
Length: 402 amino acids
Theoretical weight: 46.47 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P30419 (Residues: 99-496; Coverage: 80%)
Gene names: NMT, NMT1
Sequence domains:
Structure domains: Aminopeptidase
Calcineurin B-like protein 4 Chains: C, D
Molecule details ›
Chains: C, D
Length: 8 amino acids
Theoretical weight: 839 Da
Source organism: Arabidopsis thaliana
Expression system: Not provided
UniProt:
  • Canonical: O81223 (Residues: 2-9; Coverage: 4%)
Gene names: At5g24270, CBL4, MOP9.8, SOS3

Ligands and Environments


Cofactor: Ligand COA 2 x COA
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE MASSIF-1
Unit cell:
a: 58.236Å b: 79.779Å c: 178.751Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.157 0.156 0.192
Expression systems:
  • Escherichia coli BL21(DE3)
  • Not provided