5onb

X-ray diffraction
3Å resolution

Drosophila Bag-of-marbles CBM peptide bound to human CAF40

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-149787 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
CCR4-NOT transcription complex subunit 9 Chains: A, C, E, G
Molecule details ›
Chains: A, C, E, G
Length: 273 amino acids
Theoretical weight: 31.07 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q92600 (Residues: 19-285; Coverage: 89%)
Gene names: CNOT9, RCD1, RQCD1
Sequence domains: Cell differentiation family, Rcd1-like
Structure domains: Leucine-rich Repeat Variant
Protein bag-of-marbles Chains: B, D, F, H
Molecule details ›
Chains: B, D, F, H
Length: 24 amino acids
Theoretical weight: 2.87 KDa
Source organism: Drosophila melanogaster
Expression system: Not provided
UniProt:
  • Canonical: P22745 (Residues: 13-36; Coverage: 5%)
Gene names: CG10422, bam

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PETRA III, DESY BEAMLINE P11
Spacegroup: P21212
Unit cell:
a: 105.57Å b: 200.93Å c: 59.6Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.218 0.216 0.268
Expression systems:
  • Escherichia coli BL21(DE3)
  • Not provided