› 5ou7

X-ray diffraction
1.9Å resolution

Crystal structure of the Glycoprotein VI loop truncation mutant PAVS-PAPYKN

Released:
DOI: 10.2210/pdb5ou7/pdb
PDB entry 5ou7 coloured by chain, front view.
PDB entry 5ou7 coloured by chain, side view.
PDB entry 5ou7 coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Feitsma LJ, Huizinga EG

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-190788 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Platelet glycoprotein VI Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 181 amino acids
Theoretical weight: 19.72 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:
  • Canonical: Q9HCN6 (Residues: 21-206; Coverage: 55%)
Gene name: GP6
Sequence domains:
Structure domains: Immunoglobulins

Ligands and Environments

4 bound ligands:
Ligand CL 14 x CL
Ligand PO4 2 x PO4
Ligand PG6 2 x PG6
Ligand NAG 4 x NAG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X06SA
Spacegroup: P21
Unit cell:
a: 78.65Å b: 44.05Å c: 117.66Å
α: 90° β: 104.69° γ: 90°
R-values:
R R work R free
0.223 0.221 0.26
Expression system: Homo sapiens

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