› 5xqm

Solution NMR

NMR solution structure of SMO1, Sumo homologue in Caenorhabditis elegans

Released:
DOI: 10.2210/pdb5xqm/pdb
PDB entry 5xqm coloured by chain, ensemble of 20 models, front view.
PDB entry 5xqm coloured by chain, ensemble of 20 models, side view.
PDB entry 5xqm coloured by chain, ensemble of 20 models, top view.
Source organism: Caenorhabditis elegans
Primary publication:
Structural and functional analysis of SMO-1, the SUMO homolog in Caenorhabditis elegans.
Surana P, Gowda CM, Tripathi V, Broday L, Das R
PLoS One 12 e0186622 (2017)
PMID: 29045470

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-157322 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Small ubiquitin-related modifier Chain: A
Molecule details ›
Chain: A
Length: 97 amino acids
Theoretical weight: 11.05 KDa
Source organism: Caenorhabditis elegans
Expression system: Escherichia coli
UniProt:
  • Canonical: P55853 (Residues: 1-90; Coverage: 99%)
Gene names: K12C11.2, smo-1, smt3, sumo
Sequence domains: Ubiquitin family

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 83%
Refinement method: simulated annealing
Expression system: Escherichia coli

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Citations

1 citations in other articles

Profiling Substrate Specificity of the SUMO Protease Ulp1 by the YESS-PSSC System to Advance the Conserved Mechanism for Substrate Cleavage.
Zhang et al. (2022)

3 mentions without citation

Ubiquitin and Ubiquitin-Like Proteins and Domains in Ribosome Production and Function: Chance or Necessity?
Martín-Villanueva et al. (2021)
2 more