5bwa

X-ray diffraction
3.2Å resolution

Crystal structure of ODC-PLP-AZ1 ternary complex

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-145983 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Ornithine decarboxylase Chain: A
Molecule details ›
Chain: A
Length: 461 amino acids
Theoretical weight: 51.2 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P11926 (Residues: 1-461; Coverage: 100%)
Gene name: ODC1
Sequence domains:
Structure domains:
Ornithine decarboxylase antizyme 1 Chain: B
Molecule details ›
Chain: B
Length: 160 amino acids
Theoretical weight: 18.1 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P54368 (Residues: 69-228; Coverage: 70%)
Gene names: OAZ, OAZ1
Sequence domains: Ornithine decarboxylase antizyme
Structure domains: Aminopeptidase

Ligands and Environments


Cofactor: Ligand PLP 1 x PLP
No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X06SA
Spacegroup: P212121
Unit cell:
a: 53.154Å b: 74.084Å c: 157.083Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.232 0.229 0.29
Expression system: Escherichia coli BL21(DE3)