› 5e0f

X-ray diffraction
1.4Å resolution

Human pancreatic alpha-amylase in complex with mini-montbretin A

Released:
DOI: 10.2210/pdb5e0f/pdb
PDB entry 5e0f coloured by chain, front view.
PDB entry 5e0f coloured by chain, side view.
PDB entry 5e0f coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Caner S, Brayer GD

Function and Biology Details

Reaction catalysed: 
Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-138163 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Pancreatic alpha-amylase Chain: A
Molecule details ›
Chain: A
Length: 496 amino acids
Theoretical weight: 55.93 KDa
Source organism: Homo sapiens
Expression system: Komagataella pastoris
UniProt:
  • Canonical: P04746 (Residues: 16-511; Coverage: 100%)
Gene name: AMY2A
Sequence domains:
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand 5J7 1 x 5J7
Ligand CA 1 x CA
Ligand CL 1 x CL
1 modified residue:
Ligand PCA 1 x PCA

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL7-1
Spacegroup: P212121
Unit cell:
a: 52.32Å b: 73.19Å c: 133.74Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.156 0.155 0.181
Expression system: Komagataella pastoris

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