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X-ray diffraction
2.15Å resolution

PYRUVATE DECARBOXYLASE FROM ZYMOBACTER PALMAE

Released:
Source organism: Zymobacter palmae
Primary publication:
Crystal structure of pyruvate decarboxylase from Zymobacter palmae.
Acta Crystallogr F Struct Biol Commun 72 700-6 (2016)
PMID: 27599861

Function and Biology Details

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-185217 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
pyruvate decarboxylase Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X
Length: 573 amino acids
Theoretical weight: 61.88 KDa
Source organism: Zymobacter palmae
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q8KTX6 (Residues: 1-556; Coverage: 100%)
Gene name: pdc
Sequence domains:

Ligands and Environments


Cofactor: Ligand TPP 24 x TPP
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: AUSTRALIAN SYNCHROTRON BEAMLINE MX2
Spacegroup: P21
Unit cell:
a: 204.557Å b: 177.39Å c: 244.553Å
α: 90° β: 112.94° γ: 90°
R-values:
R R work R free
0.188 0.186 0.22
Expression system: Escherichia coli BL21