5fx8

X-ray diffraction
2.6Å resolution

Complete structure of manganese lipoxygenase of Gaeumannomyces graminis and partial structure of zonadhesin of Komagataella pastoris

Released:

Function and Biology Details

Reaction catalysed:
Linoleate + O(2) = (9Z,12Z)-(11S)-11-hydroperoxyoctadeca-9,12-dienoate
Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-123394 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (5 distinct):
Manganese lipoxygenase Chains: A, B
Molecule details ›
Chains: A, B
Length: 618 amino acids
Theoretical weight: 67.66 KDa
Source organism: Gaeumannomyces avenae
Expression system: Komagataella pastoris
UniProt:
  • Canonical: Q8X151 (Residues: 1-618; Coverage: 100%)
Sequence domains: Lipoxygenase
Putative adhesin Chain: U
Molecule details ›
Chain: U
Length: 320 amino acids
Theoretical weight: 34.56 KDa
Source organism: Komagataella phaffii CBS 7435
UniProt:
  • Canonical: F2QXM5 (Residues: 20-339; Coverage: 56%)
Gene name: PP7435_Chr3-1213

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID29
Spacegroup: C2
Unit cell:
a: 226.309Å b: 50.47Å c: 177.622Å
α: 90° β: 91.28° γ: 90°
R-values:
R R work R free
0.198 0.195 0.245
Expression system: Komagataella pastoris